|
KMID : 0364820180540010069
|
|
Korean Journal of Microbiology
2018 Volume.54 No. 1 p.69 ~ p.70
|
|
|
Draft genome sequence of a bacterial plant pathogen Erwinia pyrifoliae strain EpK1/15 isolated from an apple twig showing black shoot blight
|
|
Lee Gyu-Min
Oh Eom-Ji
Ko Se-Young
Park Jung-Kum
Park Duck-Hwan
Kim Dong-Hyuk
Oh Chang-Sik
|
|
|
Abstract
|
|
|
|
Erwinia pyrifoliae is a Gram-negative bacterium causing black shoot blight in apple and Asian pear trees. E. pyrifoliae strain EpK1/15 was isolated in 2014 from an apple twig from the Pocheon, Gyeonggi-do, South Korea. In this study, we report the draft genome sequence of E. pyrifoliae EpK1/15 using PacBio RS II platform. The draft genome is comprised of a circular chromosome with 4,027,225 bp and 53.4% G + C content and a plasmid with 48,456 bp and 50.3% G + C content. The draft genome includes 3,798 protein-coding genes, 22 rRNA genes, 77 tRNA genes, 13 non-coding RNA genes, and 231 pseudo genes.
|
|
|
KEYWORD
|
|
|
Erwinia pyrifoliae, apple, black shoot blight, draft genome sequence, PacBio RS II
|
|
|
FullTexts / Linksout information
|
|
|
|
|
|
Listed journal information
|
|
|
|